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Molecular Biology > Restriction Enzyme Mapping

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  • REBASE: The Restriction Enzyme Database
    Collection of information about restriction enzymes, methylases, the microorganisms from which they have been isolated, recognition sequences, cleavage sites, methylation specificity, the commercial availability of the enzymes, and references.
    rebase.neb.com/rebase/rebase.html
  • Restriction Mapper
    Finds restriction endonuclease cleavage sites in DNA sequences. Supports linear and circular DNA and provides several ways to sort and filter output.
    www.restrictionmapper.org
  • NEBcutter
    Online DNA restriction mapping tool.
    tools.neb.com/NEBcutter/index.php3
  • CloneIt
    An online program finding sub-cloning strategies, in-frame deletions, and frameshifts using restriction enzymes and DNA polymerases.
    topaze.jouy.inra.fr/cgi-bin/CloneIt/CloneIt
  • REBASE Digest
    Online tool which takes a DNA sequence and digests it with one example of each of the known Type 2 restriction enzyme specificities.
    tools.neb.com/REBsites/index.php3
  • WatCut
    Online restriction mapping, silent mutagenesis, and mutagenic primer design for SNP genotyping by restriction analysis.
    watcut.uwaterloo.ca
  • Restriction Enzyme Analysis
    Identifies restriction mapping sites in DNA sequences.
    scopes.sci.geneseo.edu/~yin/WebGene/RE.html
 




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