RNA Research Software in the Yahoo! Directory

Sfold
Software that predicts probable RNA secondary structures, assesses target accessibility, and provides tools for the rational design of RNA-targeting nucleic acids.
sfold.wadsworth.org
Vienna RNA Package: RNA Secondary Structure Prediction and Comparison
Consists of a C code library and several stand-alone programs for the prediction and comparison of RNA secondary structures.
www.tbi.univie.ac.at/~ivo/RNA
RNA Simplex: An Interactive Graphics Tool for Visualizing RNA Composition Space
Tool designed for the analysis of nucleotide base composition in RNA (or DNA) sequences.
www.santafe.edu/~pth/simplex.html
RnaViz
Portable, GUI program for producing publication-quality secondary structure drawings of RNA molecules.
rrna.uia.ac.be/rnaviz
DCSE: Dedicated Comparative Sequence Editor
Multiple alignment editor that can be used to edit protein, DNA, or RNA alignments.
rrna.uia.ac.be/dcse